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When referring to information from the PhageDive web interface, cite: https://doi.org/10.1093/nar/gkae878
Summary Pectobacterium phage vB_PatP_CB1
Morphotype
PodovirusHost species
Pectobacterium atrosepticumSequence genome
KY514264Strains
| Reference | Strain number | Name | History |
|---|---|---|---|
| 3 | DSM 108907 | Pectobacterium phage vB_PatP_CB1 | <- C. Buttimer |
Taxonomy
| Reference | Realm | Kingdom | Phylum | Class | Family | Genus | Species | Links | Nucleic acid type | Full scientific name |
|---|---|---|---|---|---|---|---|---|---|---|
| 3 | Duplodnaviria | Heunggongvirae | Uroviricota | Caudoviricetes | Schitoviridae | Cbunavirus | Cbunavirus CB1 | dsDNA | Pectobacterium phage vB_PatP_CB1 |
Origin
| Reference | Habitat | Sampling date | Country | Country code |
|---|---|---|---|---|
| 3 | soil from potatoe fields | 01.01.2013 | Ireland | IRL |
Morphology
| Reference | Morphotype | Plaque description | Plaque size (mm) |
|---|---|---|---|
| 3 | Podovirus | clear plaques | 2-3 |
Life cycle
| Reference | Type phage | Type cycle |
|---|---|---|
| 3 | Virulent | Lytic |
Host
| Reference | Host species | Recommended host | Host strain number | BacDive ID |
|---|---|---|---|---|
| 3 | Pectobacterium atrosepticum (van Hall 1902) Gardan et al. 2003 DSM 18077 | yes | DSM 18077 | 5018 |
Host cultivation
| Reference | Medium name | DSM medium number | Temperature (C°) |
|---|---|---|---|
| 3 | NUTRIENT AGAR (DSMZ Medium 1) | 1 | 30 |
Sequence genome
| Reference | Nucleic acid type | Accession number | Assembly accession number | Sequence title | Assembly level | Genome length | GC content | Fasta file |
|---|---|---|---|---|---|---|---|---|
| 3 | dsDNA | KY514264 | GCA_002989895 | Pectobacterium phage vB_PatP_CB1, complete genome | Complete | 76041 | 48.69 |
| Reference | Title | Catalogue ID |
|---|---|---|
| 3 | German Collection of Microorganisms and Cell Cultures GmbH | DSMZ |
